Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC66945.1 | SKC66954.1 | SAMN06309945_2464 | SAMN06309945_2465 | Hypothetical protein. | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | 0.903 |
SKC66945.1 | SKC66961.1 | SAMN06309945_2464 | SAMN06309945_2466 | Hypothetical protein. | Putative membrane protein. | 0.781 |
SKC66945.1 | SKC66968.1 | SAMN06309945_2464 | SAMN06309945_2467 | Hypothetical protein. | Hypothetical protein. | 0.781 |
SKC66945.1 | SKC66975.1 | SAMN06309945_2464 | SAMN06309945_2468 | Hypothetical protein. | Protein of unknown function. | 0.778 |
SKC66945.1 | SKC66996.1 | SAMN06309945_2464 | SAMN06309945_2469 | Hypothetical protein. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.799 |
SKC66945.1 | SKC67002.1 | SAMN06309945_2464 | SAMN06309945_2470 | Hypothetical protein. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.790 |
SKC66945.1 | SKC67010.1 | SAMN06309945_2464 | SAMN06309945_2471 | Hypothetical protein. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.810 |
SKC66945.1 | folE | SAMN06309945_2464 | SAMN06309945_2472 | Hypothetical protein. | GTP cyclohydrolase I. | 0.803 |
SKC66945.1 | ftsH | SAMN06309945_2464 | SAMN06309945_2473 | Hypothetical protein. | Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.781 |
SKC66954.1 | SKC66945.1 | SAMN06309945_2465 | SAMN06309945_2464 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Hypothetical protein. | 0.903 |
SKC66954.1 | SKC66961.1 | SAMN06309945_2465 | SAMN06309945_2466 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Putative membrane protein. | 0.837 |
SKC66954.1 | SKC66968.1 | SAMN06309945_2465 | SAMN06309945_2467 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Hypothetical protein. | 0.837 |
SKC66954.1 | SKC66975.1 | SAMN06309945_2465 | SAMN06309945_2468 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Protein of unknown function. | 0.829 |
SKC66954.1 | SKC66996.1 | SAMN06309945_2465 | SAMN06309945_2469 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.826 |
SKC66954.1 | SKC67002.1 | SAMN06309945_2465 | SAMN06309945_2470 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.829 |
SKC66954.1 | SKC67010.1 | SAMN06309945_2465 | SAMN06309945_2471 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.829 |
SKC66954.1 | folE | SAMN06309945_2465 | SAMN06309945_2472 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | GTP cyclohydrolase I. | 0.829 |
SKC66954.1 | ftsH | SAMN06309945_2465 | SAMN06309945_2473 | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.829 |
SKC66961.1 | SKC66945.1 | SAMN06309945_2466 | SAMN06309945_2464 | Putative membrane protein. | Hypothetical protein. | 0.781 |
SKC66961.1 | SKC66954.1 | SAMN06309945_2466 | SAMN06309945_2465 | Putative membrane protein. | Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains. | 0.837 |
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