STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C683_0352Hypothetical protein. (151 aa)    
Predicted Functional Partners:
C683_0353
Acyl-ACP thioesterase.
 
     0.764
C683_1118
Hypothetical protein.
  
     0.732
C683_0354
Hypothetical protein.
       0.727
C683_0355
Hypothetical protein.
       0.516
C683_0356
HAD superfamily hydrolase.
       0.516
C683_0357
Haloacid dehalogenase-like family hydrolase.
       0.516
C683_0437
LysM domain-containing protein.
  
     0.516
C683_0580
Outer surface protein of unknown function, cellobiose operon.
 
     0.513
C683_1169
Hypothetical protein.
  
     0.509
C683_0306
Hypothetical protein.
  
     0.477
Your Current Organism:
Catellicoccus marimammalium
NCBI taxonomy Id: 1234409
Other names: C. marimammalium M35/04/3, Catellicoccus marimammalium M35/04/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.