STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C683_0422Putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family. (235 aa)    
Predicted Functional Partners:
C683_0423
FIG000605: protein co-occurring with transport system (COG1739).
       0.773
C683_0235
Pyruvate-flavodoxin oxidoreductase.
    
  0.700
C683_0661
Trehalose-specific PTS system II.
 
  
 0.644
C683_0424
ComF operon protein A, DNA transporter ATPase.
       0.623
C683_0497
Maltose and glucose-specific PTS system II.
  
  
 0.595
C683_1165
Glucose-specific PTS system II.
  
  
 0.595
C683_0936
Transcriptional regulator, LacI family.
  
   
 0.585
C683_0775
Catabolite control protein A.
  
   
 0.530
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.476
C683_0114
Xaa-His dipeptidase.
 
      0.451
Your Current Organism:
Catellicoccus marimammalium
NCBI taxonomy Id: 1234409
Other names: C. marimammalium M35/04/3, Catellicoccus marimammalium M35/04/3
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