STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C683_0855ATPase involved in DNA repair. (458 aa)    
Predicted Functional Partners:
C683_0854
Hypothetical protein.
       0.752
C683_0856
Hypothetical protein.
       0.741
C683_0857
Hypothetical protein.
       0.741
C683_0858
Hypothetical protein.
       0.736
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.634
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.631
C683_0853
LtrC-like protein.
       0.606
C683_1102
Tyrosyl-tRNA synthetase cluster 1.
    
   0.542
C683_0538
Serine protease, DegP/HtrA.
   
 0.538
C683_1094
Copper-translocating P-type ATPase; Lead, cadmium, zinc and mercury transporting ATPase.
  
  
 0.453
Your Current Organism:
Catellicoccus marimammalium
NCBI taxonomy Id: 1234409
Other names: C. marimammalium M35/04/3, Catellicoccus marimammalium M35/04/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.