STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C683_0930Putative prenyltransferase; Contains 1,4-dihydroxy-2-naphthoate octaprenyltransferase domain. (296 aa)    
Predicted Functional Partners:
C683_0929
NtrC family Transcriptional regulator.
 
     0.828
C683_0249
Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
   
 
 0.770
C683_0704
Octaprenyl-diphosphate synthase; Dimethylallyltransferase / Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
    
 0.601
C683_0944
Integral membrane protein.
  
     0.574
C683_1080
Putative competence protein ComGC.
  
     0.568
C683_0931
Unspecified monosaccharide ABC transport system, permease component 2; Belongs to the binding-protein-dependent transport system permease family.
       0.531
C683_0932
Putative deoxyribose-specific ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.531
C683_0933
ABC transporter.
       0.531
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
  0.499
C683_0722
Methyltransferase; FIG145533.
    
 0.462
Your Current Organism:
Catellicoccus marimammalium
NCBI taxonomy Id: 1234409
Other names: C. marimammalium M35/04/3, Catellicoccus marimammalium M35/04/3
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