STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C683_0976Hypothetical protein. (1022 aa)    
Predicted Functional Partners:
C683_0975
Hypothetical protein.
       0.773
C683_0182
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
    
 0.625
C683_0299
Cell surface protein.
 
  
  0.525
C683_0420
Protein YidD.
  
     0.519
C683_1179
N-acetylmuramoyl-L-alanine amidase.
    
 0.504
C683_0322
Putative extracellular matrix binding protein.
 
  
 
0.478
C683_0971
Cell surface protein precursor.
 
     0.459
C683_0974
Hypothetical protein.
 
    
0.455
C683_1135
Glucokinase.
 
  
  0.411
Your Current Organism:
Catellicoccus marimammalium
NCBI taxonomy Id: 1234409
Other names: C. marimammalium M35/04/3, Catellicoccus marimammalium M35/04/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.