STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C725_0014Mannose-1-phosphate guanylyltransferase (GDP). (378 aa)    
Predicted Functional Partners:
C725_0015
Sugar transferase.
 
 
 0.998
C725_0462
Mannose-6-phosphate isomerase.
 
 
 0.991
C725_0425
Glucose-6-phosphate isomerase.
  
 
 0.969
C725_2245
Phosphomannomutase.
  
 0.968
C725_2348
Nucleotidyltransferase.
  
 
 0.959
C725_0265
Extracellular Matrix protein PslA.
 
 
 0.958
C725_2941
Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.953
C725_0579
UDP-glucose dehydrogenase.
 
 
 0.947
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 0.939
C725_1926
GCN5-related N-acetyltransferase.
  
 
 0.933
Your Current Organism:
Pacificimonas flava
NCBI taxonomy Id: 1234595
Other names: CGMCC 1.12401, LMG 27364, LMG:27364, P. flava, Pacificamonas flava, Pacificimonas flava corrig. Liu et al. 2016, alpha proteobacterium JLT2015, strain JLT2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.