STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C725_0376Molybdopterin oxidoreductase. (670 aa)    
Predicted Functional Partners:
C725_0375
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 0.999
C725_0397
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 0.999
C725_0374
Molybdopterin oxidoreductase subunit, predicted.
 
 
 0.993
C725_0378
Hypothetical protein.
 
   0.988
C725_0377
ABC-type Fe3+ transport system protein.
 
 
  0.984
C725_0396
Chaperone protein HtpG.
 
 
 0.973
C725_0381
Cytochrome c oxidase polypeptide II.
 
 
 0.972
C725_0401
Hypothetical protein.
 
   0.962
C725_0400
ABC-type Fe3+ transport system protein.
 
 
  0.932
C725_0811
Putative formate dehydrogenase oxidoreductase protein.
 
 0.908
Your Current Organism:
Pacificimonas flava
NCBI taxonomy Id: 1234595
Other names: CGMCC 1.12401, LMG 27364, LMG:27364, P. flava, Pacificamonas flava, Pacificimonas flava corrig. Liu et al. 2016, alpha proteobacterium JLT2015, strain JLT2015
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