STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C725_1435Phosphoenolpyruvate-protein phosphotransferase of PTS system; Belongs to the PEP-utilizing enzyme family. (760 aa)    
Predicted Functional Partners:
C725_2130
Phosphocarrier protein HPr.
  
 
 0.975
C725_1021
PTS IIA-like nitrogen-regulatory protein PtsN.
  
   
 0.799
C725_2611
Multi-sensor hybrid histidine kinase.
   
  0.737
C725_2131
PTS system permease (IIAMan), nitrogen regulatory IIA protein.
  
   
 0.711
C725_2133
HPr kinase/phosphorylase.
  
     0.643
C725_0431
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
    
  0.632
C725_2609
Pole remodelling regulatory diguanylate cyclase.
   
  0.549
C725_0084
Hypothetical protein.
    
  0.547
C725_1165
Response regulator receiver domain protein.
    
  0.522
C725_1167
Chemotaxis protein methyltransferase CheR.
    
  0.522
Your Current Organism:
Pacificimonas flava
NCBI taxonomy Id: 1234595
Other names: CGMCC 1.12401, LMG 27364, LMG:27364, P. flava, Pacificamonas flava, Pacificimonas flava corrig. Liu et al. 2016, alpha proteobacterium JLT2015, strain JLT2015
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