STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C725_1790Beta-lactamase class C. (412 aa)    
Predicted Functional Partners:
C725_1791
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.792
C725_1788
3-oxoacyl-[acyl-carrier protein] reductase.
       0.762
C725_1789
TesB-like acyl-CoA thioesterase 1.
       0.762
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.577
C725_1793
Acyl-CoA dehydrogenase family protein.
 
     0.531
C725_1787
Inositol monophosphatase family protein.
       0.523
C725_1792
Aspartyl-tRNA(Asn) amidotransferase subunit A.
       0.506
C725_2125
Putative gluconolactonase.
  
     0.466
Your Current Organism:
Pacificimonas flava
NCBI taxonomy Id: 1234595
Other names: CGMCC 1.12401, LMG 27364, LMG:27364, P. flava, Pacificamonas flava, Pacificimonas flava corrig. Liu et al. 2016, alpha proteobacterium JLT2015, strain JLT2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.