STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C725_2357Oxidoreductase, short-chain dehydrogenase/reductase family. (391 aa)    
Predicted Functional Partners:
C725_2743
Glutamate synthase [NADPH] large chain.
    
  0.875
C725_1972
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.738
C725_2957
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.725
C725_0177
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.659
C725_2356
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
       0.570
C725_2016
FolM Alternative dihydrofolate reductase 1.
  
 
  0.560
C725_0978
Chalcone synthase.
    
 0.525
C725_0248
Fatty acid alpha hydroxylase.
  
 0.523
C725_2662
Short-chain dehydrogenase/reductase SDR.
  
 
  0.507
C725_0167
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.490
Your Current Organism:
Pacificimonas flava
NCBI taxonomy Id: 1234595
Other names: CGMCC 1.12401, LMG 27364, LMG:27364, P. flava, Pacificamonas flava, Pacificimonas flava corrig. Liu et al. 2016, alpha proteobacterium JLT2015, strain JLT2015
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.