STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000613285_01367Unannotated protein. (132 aa)    
Predicted Functional Partners:
GCA_000613285_00205
Unannotated protein.
  
 
 0.732
GCA_000613285_00451
Unannotated protein.
     
 0.643
GCA_000613285_01259
Unannotated protein.
    
  0.603
GCA_000613285_03426
Unannotated protein.
    
  0.603
GCA_000613285_03454
Unannotated protein.
    
  0.603
GCA_000613285_01368
Unannotated protein.
       0.508
GCA_000613285_01366
Unannotated protein.
   
 
 0.482
GCA_000613285_01131
Unannotated protein.
     
 0.434
GCA_000613285_01637
Unannotated protein.
     
 0.434
GCA_000613285_03150
Unannotated protein.
    
 0.407
Your Current Organism:
Acetobacter papayae
NCBI taxonomy Id: 1234671
Other names: A. papayae JCM 25143, Acetobacter papayae 1-25, Acetobacter papayae JCM 25143, Acetobacter papayae LMG 26456, Acetobacter sp. 1-25, Acetobacter sp. JCM 25143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.