STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000613285_02920Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000613285_03516
Unannotated protein.
  
  
 
0.807
GCA_000613285_01967
Unannotated protein.
  
  
 
0.804
GCA_000613285_00904
Unannotated protein.
    
 0.757
GCA_000613285_00635
Unannotated protein.
   
 
 0.714
GCA_000613285_01699
Unannotated protein.
   
   0.702
GCA_000613285_03499
Unannotated protein.
 
  
  0.700
GCA_000613285_01278
Unannotated protein.
    
   0.684
GCA_000613285_02440
Unannotated protein.
    
   0.684
GCA_000613285_03497
Unannotated protein.
    
  0.659
GCA_000613285_03498
Unannotated protein.
    
  0.659
Your Current Organism:
Acetobacter papayae
NCBI taxonomy Id: 1234671
Other names: A. papayae JCM 25143, Acetobacter papayae 1-25, Acetobacter papayae JCM 25143, Acetobacter papayae LMG 26456, Acetobacter sp. 1-25, Acetobacter sp. JCM 25143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.