STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csc1B-2Cell surface protein with WxL domain. (250 aa)    
Predicted Functional Partners:
BN424_2794
Conserved repeat domain protein.
 
  
 0.860
csc2A
Conserved hypothetical protein.
 
    0.857
csc2A-2
Conserved hypothetical protein.
 
    0.776
csc2A-4
Conserved hypothetical protein.
 
    0.776
yqbJ
Conserved hypothetical protein.
 
    0.775
csc2A-3
Conserved hypothetical protein.
 
    0.775
BN424_1625
Hypothetical protein.
  
     0.773
BN424_2793
LPXTG-motif cell wall anchor domain protein.
       0.773
BN424_3085
Hypothetical protein.
  
     0.773
BN424_3084
Hypothetical protein.
  
     0.772
Your Current Organism:
Carnobacterium maltaromaticum
NCBI taxonomy Id: 1234679
Other names: C. maltaromaticum LMA28, Carnobacterium maltaromaticum LMA28
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.