STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK95_11355Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
ARQ02584.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.972
ARQ00625.1
Catechol 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.928
ARQ02565.1
4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.907
ARQ00119.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.901
ARQ03028.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.901
ARQ01187.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
ARP97897.1
2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.722
ARP99836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.646
ARP99615.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
     
 0.543
ARQ00552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.463
Your Current Organism:
Pseudorhodoplanes sinuspersici
NCBI taxonomy Id: 1235591
Other names: CECT 8374, IBRC-M 10770, P. sinuspersici, Pseudorhodoplanes sinuspersici Tirandaz et al. 2015, bacterium C16-RIPI 110, strain RIPI 110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.