STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000330705_00807Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000330705_00808
Unannotated protein.
 
  0.971
GCA_000330705_00810
Unannotated protein.
 
 
  0.953
GCA_000330705_02581
Unannotated protein.
  
  0.877
GCA_000330705_02582
Unannotated protein.
  
  0.877
GCA_000330705_02507
Unannotated protein.
  
  0.876
GCA_000330705_02205
Unannotated protein.
  
  0.872
GCA_000330705_02394
Unannotated protein.
  
  0.868
GCA_000330705_02584
Unannotated protein.
  
 
  0.842
GCA_000330705_02396
Unannotated protein.
  
 
  0.840
GCA_000330705_02505
Unannotated protein.
  
 
  0.832
Your Current Organism:
Salinicoccus carnicancri
NCBI taxonomy Id: 1235755
Other names: S. carnicancri Crm, Salinicoccus carnicancri Crm, Salinicoccus sp. Crm
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.