STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000330705_02270Unannotated protein. (62 aa)    
Predicted Functional Partners:
GCA_000330705_02269
Unannotated protein.
       0.800
GCA_000330705_02271
Unannotated protein.
       0.785
GCA_000330705_01860
Unannotated protein.
  
     0.768
GCA_000330705_01563
Unannotated protein.
 
     0.692
GCA_000330705_00357
Unannotated protein.
  
     0.683
GCA_000330705_01884
Unannotated protein.
  
     0.677
GCA_000330705_01867
Unannotated protein.
  
     0.646
GCA_000330705_00430
Unannotated protein.
  
     0.642
GCA_000330705_01940
Unannotated protein.
  
     0.642
GCA_000330705_00076
Unannotated protein.
  
     0.622
Your Current Organism:
Salinicoccus carnicancri
NCBI taxonomy Id: 1235755
Other names: S. carnicancri Crm, Salinicoccus carnicancri Crm, Salinicoccus sp. Crm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.