STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C802_00128Hypothetical protein. (359 aa)    
Predicted Functional Partners:
C802_00129
Hypothetical protein.
       0.842
C802_00130
Hypothetical protein.
       0.842
C802_00127
Peptidyl-dipeptidase Dcp.
       0.724
C802_02483
Hypothetical protein.
  
     0.706
C802_00712
Cell division protein FtsQ.
  
     0.703
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
   
 0.691
C802_01069
Hypothetical protein.
  
     0.675
C802_00674
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.673
C802_00131
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.672
C802_03716
Hypothetical protein.
  
     0.672
Your Current Organism:
Bacteroides sartorii
NCBI taxonomy Id: 1235788
Other names: B. sartorii dnLKV3, Bacteroides sartorii dnLKV3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.