STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C809_02312Hypothetical protein. (69 aa)    
Predicted Functional Partners:
C809_02313
Hypothetical protein.
 
     0.875
C809_02309
Hypothetical protein.
  
     0.694
C809_02419
Hypothetical protein.
  
     0.615
C809_01656
Hypothetical protein.
  
     0.484
C809_01685
Hypothetical protein.
  
     0.475
C809_02420
Sigma-70 family RNA polymerase sigma factor.
  
     0.442
C809_04380
Hypothetical protein.
  
     0.429
C809_03965
Hypothetical protein.
  
     0.422
C809_01872
Hypothetical protein.
  
     0.407
Your Current Organism:
Lachnospiraceae bacterium MD335
NCBI taxonomy Id: 1235793
Other names: L. bacterium MD335, Lachnospiraceae bacterium COE1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.