STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C816_03617Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (356 aa)    
Predicted Functional Partners:
C816_03618
Hypothetical protein.
 
 0.974
C816_03619
Hypothetical protein.
 
 
 0.906
C816_03616
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.855
C816_03615
Hypothetical protein.
       0.786
C816_01083
Hypothetical protein.
  
 0.640
C816_02131
Hypothetical protein.
  
 0.640
C816_02554
Simple sugar transport system ATP-binding protein.
  
 0.640
C816_04170
Hypothetical protein.
  
 0.640
C816_04164
Hypothetical protein.
   
 0.617
C816_00359
Hypothetical protein.
   
 0.588
Your Current Organism:
Oscillibacter sp. 13
NCBI taxonomy Id: 1235797
Other names: O. sp. 1-3, Oscillibacter sp. 1-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.