STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C816_03622Hypothetical protein. (120 aa)    
Predicted Functional Partners:
C816_02110
Hypothetical protein.
 
 0.987
C816_02413
Hypothetical protein.
 
 0.980
C816_04044
Hypothetical protein.
  
 0.980
C816_01729
Hypothetical protein.
  
 0.976
C816_02109
Hypothetical protein.
 
0.956
C816_02412
Hypothetical protein.
 
 0.947
C816_02375
Flagellar motor switch protein FliN.
  
 
 0.937
C816_02386
Chemotaxis protein CheC.
 
 
 0.911
C816_02358
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.888
C816_02376
Two-component system, chemotaxis family, response regulator CheY.
  
0.842
Your Current Organism:
Oscillibacter sp. 13
NCBI taxonomy Id: 1235797
Other names: O. sp. 1-3, Oscillibacter sp. 1-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.