Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C818_01886 | C818_02301 | C818_01886 | C818_02301 | Hypothetical protein. | Hypothetical protein. | 0.530 |
C818_01886 | C818_02749 | C818_01886 | C818_02749 | Hypothetical protein. | Hypothetical protein. | 0.678 |
C818_01886 | C818_03379 | C818_01886 | C818_03379 | Hypothetical protein. | Glutamine synthetase, type I. | 0.484 |
C818_01886 | rpoC | C818_01886 | C818_01065 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.407 |
C818_02300 | C818_02301 | C818_02300 | C818_02301 | Hypothetical protein. | Hypothetical protein. | 0.534 |
C818_02301 | C818_01886 | C818_02301 | C818_01886 | Hypothetical protein. | Hypothetical protein. | 0.530 |
C818_02301 | C818_02300 | C818_02301 | C818_02300 | Hypothetical protein. | Hypothetical protein. | 0.534 |
C818_02301 | C818_02302 | C818_02301 | C818_02302 | Hypothetical protein. | Aminoglycoside N3'-acetyltransferase. | 0.536 |
C818_02301 | C818_02749 | C818_02301 | C818_02749 | Hypothetical protein. | Hypothetical protein. | 0.594 |
C818_02301 | C818_03379 | C818_02301 | C818_03379 | Hypothetical protein. | Glutamine synthetase, type I. | 0.601 |
C818_02301 | accD | C818_02301 | C818_01532 | Hypothetical protein. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.841 |
C818_02301 | dnaJ | C818_02301 | C818_00343 | Hypothetical protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.594 |
C818_02301 | rpoA | C818_02301 | C818_01292 | Hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.485 |
C818_02301 | rpoB | C818_02301 | C818_01066 | Hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.552 |
C818_02301 | rpoC | C818_02301 | C818_01065 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.485 |
C818_02302 | C818_02301 | C818_02302 | C818_02301 | Aminoglycoside N3'-acetyltransferase. | Hypothetical protein. | 0.536 |
C818_02749 | C818_01886 | C818_02749 | C818_01886 | Hypothetical protein. | Hypothetical protein. | 0.678 |
C818_02749 | C818_02301 | C818_02749 | C818_02301 | Hypothetical protein. | Hypothetical protein. | 0.594 |
C818_03379 | C818_01886 | C818_03379 | C818_01886 | Glutamine synthetase, type I. | Hypothetical protein. | 0.484 |
C818_03379 | C818_02301 | C818_03379 | C818_02301 | Glutamine synthetase, type I. | Hypothetical protein. | 0.601 |
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