STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C818_02496Hypothetical protein. (696 aa)    
Predicted Functional Partners:
C818_02495
Hypothetical protein.
 
 0.969
C818_02493
Hypothetical protein.
 
   
 0.849
C818_00908
ABC transporter ATP-binding protein.
 
 0.728
C818_01461
Hypothetical protein.
 
 0.690
C818_00397
Hypothetical protein.
 
 0.677
C818_00403
Hypothetical protein.
 
 0.673
C818_03244
Hypothetical protein.
 
 0.663
C818_00404
Hypothetical protein.
  
    0.645
C818_02227
ABC transporter ATP-binding protein.
 
 0.644
C818_02417
Hypothetical protein.
  
    0.629
Your Current Organism:
Lachnospiraceae bacterium MD308
NCBI taxonomy Id: 1235799
Other names: L. bacterium MD308, Lachnospiraceae bacterium 3-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.