STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C819_02097Hypothetical protein. (215 aa)    
Predicted Functional Partners:
C819_01210
Hypothetical protein.
 0.980
C819_02096
Hypothetical protein.
 
  0.963
C819_01800
Hypothetical protein.
  0.916
C819_04152
Hypothetical protein.
 
  0.877
C819_02321
PAS domain S-box protein.
 
 0.859
C819_04012
Hypothetical protein.
 
  0.854
C819_00392
Hypothetical protein.
 
  0.843
C819_00535
Hypothetical protein.
  
 0.830
C819_01821
Hypothetical protein.
 
 0.829
C819_00078
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.819
Your Current Organism:
Lachnospiraceae bacterium 101
NCBI taxonomy Id: 1235800
Other names: L. bacterium 10-1, Lachnospiraceae bacterium 10-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.