STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE22870.1Branched-chain amino acid aminotransferase. (339 aa)    
Predicted Functional Partners:
GAE23336.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.929
GAE23337.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.929
GAE21926.1
Aspartokinase/homoserine dehydrogenase.
  
 
 0.912
GAE21927.1
Aspartokinase.
  
 
 0.912
GAE21728.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.898
GAE21729.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.898
GAE23079.1
long-chain-fatty-acid-CoA ligase.
  
 0.897
GAE23278.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.895
GAE23279.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.895
GAE23280.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.895
Your Current Organism:
Bacteroides pyogenes JCM10003
NCBI taxonomy Id: 1235813
Other names: B. pyogenes JCM 10003, Bacteroides pyogenes JCM 10003
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