STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW05613.1Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. (167 aa)    
Predicted Functional Partners:
SDW81140.1
Allosteric NADP-dependent malic enzyme.
    
  0.740
SDW05496.1
ABC-2 type transport system ATP-binding protein.
   
 
 0.636
SDW05532.1
Hypothetical protein.
       0.601
fbp
D-fructose 1,6-bisphosphatase; Belongs to the FBPase class 1 family.
     
 0.601
SDW05418.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
     
 0.584
SDW05455.1
DinB superfamily protein.
       0.567
SDW05652.1
Aspartate kinase; Belongs to the aspartokinase family.
       0.546
SDW15102.1
Uncharacterized membrane protein.
  
     0.487
SDW62200.1
Beta-glucosidase.
  
 
  0.478
SDX05372.1
PKD repeat-containing protein.
    
 0.477
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.