STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW10046.1Glutamate synthase (NADH) small subunit. (490 aa)    
Predicted Functional Partners:
SDW09999.1
Glutamate synthase (NADH) large subunit.
 0.999
SDX09658.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
 0.999
SDW26335.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.981
SDX45524.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.981
SDW47002.1
Ferredoxin, 2Fe-2S.
    
 0.975
SDX13296.1
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.975
SDW18258.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.960
SDW63597.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.938
SDW33096.1
Glutamine synthetase.
    
 0.937
SDW09783.1
Electron transfer flavoprotein beta subunit.
   
 
 0.905
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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