STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW02121.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
SDX16610.1
Hypothetical protein.
   
    0.701
SDX10926.1
Hypothetical protein.
  
    0.664
SDW02085.1
Bacillithiol system protein YtxJ.
       0.618
SDW02151.1
Hypothetical protein.
       0.610
SDX39848.1
Arginine deiminase.
   
    0.596
SDX25808.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
   
    0.465
SDW75523.1
ATP-dependent DNA helicase RecG.
   
    0.412
SDX09516.1
ATP-dependent DNA helicase RecG.
   
    0.412
SDW02053.1
UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase.
       0.403
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.