STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW17683.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (447 aa)    
Predicted Functional Partners:
SDX35151.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.988
SDW17654.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
 
  0.961
SDW20341.1
PAS domain S-box-containing protein.
 
 
0.939
SDW34430.1
Two component regulator propeller.
 
 
 0.892
SDX48161.1
Signal transduction histidine kinase.
 
 
0.878
SDW51159.1
Signal transduction histidine kinase.
   
0.869
SDW19278.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 
0.839
SDW54180.1
PAS domain S-box-containing protein.
  
 0.832
SDX48936.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
0.814
SDW17624.1
HlyD family secretion protein.
 
     0.790
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.