STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW21659.1Glycogen debranching enzyme (alpha-1,6-glucosidase). (683 aa)    
Predicted Functional Partners:
SDW69848.1
Poly-beta-1,6 N-acetyl-D-glucosamine synthase.
  
 
  0.774
SDW21623.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
       0.631
SDX64974.1
Beta-glucosidase.
    
 0.574
SDW74997.1
Alpha galactosidase A.
     
 0.538
SDW21711.1
Hypothetical protein.
       0.505
SDW17044.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.490
SDW22080.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
     
 0.466
SDX39719.1
Starch phosphorylase.
     
 0.436
SDX53772.1
Phosphoglucomutase.
    
 0.431
SDX52977.1
Phosphomannomutase.
    
 0.431
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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