STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW34735.1Two component transcriptional regulator, LuxR family. (212 aa)    
Predicted Functional Partners:
SDX35151.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
   
 0.991
SDW54180.1
PAS domain S-box-containing protein.
 0.979
SDW34763.1
Histidine kinase.
 
  0.969
SDX41498.1
Tetratricopeptide repeat-containing protein.
  
  0.876
SDX48910.1
PAS domain S-box-containing protein.
 
 0.873
SDW62014.1
Histidine kinase.
 
  0.871
SDX40632.1
Hypothetical protein.
 
  0.869
SDX19170.1
Signal transduction histidine kinase.
  
  0.868
SDX02207.1
Hypothetical protein.
  
  0.837
SDW34792.1
Hypothetical protein.
       0.773
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.