STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW50948.1Protein of unknown function. (142 aa)    
Predicted Functional Partners:
SDW50992.1
Protein of unknown function.
       0.747
SDW50911.1
SNF2 family N-terminal domain-containing protein.
       0.659
SDW50870.1
Protein of unknown function.
       0.616
SDW50828.1
Hypothetical protein.
       0.609
SDW50667.1
Hypothetical protein.
       0.502
SDW50710.1
Hypothetical protein.
       0.502
SDW50789.1
Bacteroides conjugation system ATPase, TraG family.
       0.502
SDW50632.1
Hypothetical protein.
       0.496
SDW50751.1
Hypothetical protein.
       0.492
SDW50591.1
Bacteroides conjugative transposon TraJ protein.
       0.488
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.