STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW68556.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
SDW68599.1
Amidohydrolase.
       0.773
SDW62577.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.769
SDX26164.1
L,D-transpeptidase catalytic domain.
  
     0.761
SDX10990.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
     0.759
SDX51134.1
Protein of unknown function.
  
     0.753
SDX41953.1
HYR domain-containing protein.
  
     0.751
SDX53219.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.746
SDX66432.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.746
SDX51196.1
PKD repeat-containing protein.
  
     0.743
SDX03894.1
Hypothetical protein.
  
     0.734
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.