STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW72302.1alpha-L-fucosidase 2. (791 aa)    
Predicted Functional Partners:
SDX05372.1
PKD repeat-containing protein.
  
 0.925
SDW72428.1
Beta-galactosidase.
 
  
  0.916
SDW74997.1
Alpha galactosidase A.
  
  
 0.777
SDW72346.1
Arylsulfatase A.
       0.773
SDW72389.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
       0.773
SDW72260.1
Arylsulfatase A.
 
     0.767
SDW54873.1
alpha-L-fucosidase.
  
  
  0.764
SDW24858.1
PAP2 superfamily protein.
    
  0.696
SDW38444.1
Hypothetical protein.
    
  0.696
SDW38589.1
PAP2 superfamily protein.
    
  0.696
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.