STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW91850.1Tat (twin-arginine translocation) pathway signal sequence. (443 aa)    
Predicted Functional Partners:
SDW91878.1
Protein of unknown function.
 
     0.936
SDW91821.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.926
SDW91760.1
Hydroxypyruvate isomerase.
 
    0.853
SDW17121.1
Predicted dehydrogenase.
  
  
  0.735
SDW91920.1
Hypothetical protein.
       0.707
SDW91954.1
Uncharacterized membrane protein.
       0.707
SDW91789.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.673
SDW38858.1
Protein of unknown function.
  
     0.665
SDW69048.1
Sugar phosphate isomerase/epimerase.
  
 
  0.657
SDW06164.1
Protein of unknown function.
  
     0.582
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.