STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX10957.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
SDX10926.1
Hypothetical protein.
       0.746
SDX56819.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.669
SDW06868.1
Cystathionine beta-synthase.
    
  0.578
SDX10857.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
       0.550
SDX10890.1
Calcineurin-like phosphoesterase.
       0.550
SDX35684.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
  
     0.501
SDX16296.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
  
  
  0.498
SDW82546.1
WD40-like Beta Propeller Repeat.
  
     0.477
SDW38993.1
Protein of unknown function.
  
     0.476
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
    
  0.469
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.