STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX49999.1L-asparaginase. (161 aa)    
Predicted Functional Partners:
SDW09999.1
Glutamate synthase (NADH) large subunit.
    
 0.922
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.879
SDW61319.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.868
SDW60865.1
Argininosuccinate synthase.
   
 
 0.863
SDW81906.1
Aspartate aminotransferase.
     
 0.862
SDX50437.1
Aspartate aminotransferase.
     
 0.862
SDX67504.1
Aspartate kinase; Belongs to the aspartokinase family.
  
  
  0.855
SDW05652.1
Aspartate kinase; Belongs to the aspartokinase family.
  
  
  0.854
SDX48631.1
Aspartate kinase.
    
 0.854
SDX37977.1
Aspartate aminotransferase.
     
 0.797
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.