STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX70641.1Hypothetical protein. (876 aa)    
Predicted Functional Partners:
SDX47311.1
RHS repeat-associated core domain-containing protein.
 
     0.953
SDX69553.1
RHS repeat-associated core domain-containing protein.
 
     0.847
SDX69328.1
RHS repeat-associated core domain-containing protein.
 
    
0.814
SDX55053.1
RHS repeat-associated core domain-containing protein.
 
     0.793
SDW57973.1
Hypothetical protein.
  
     0.775
SDX54994.1
Hypothetical protein.
  
     0.775
SDX69270.1
Hypothetical protein.
  
     0.775
SDX69880.1
Hypothetical protein.
  
     0.775
SDW62308.1
Protein of unknown function.
  
     0.713
SDW62577.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.659
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.