STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX70836.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
SDX70809.1
Hypothetical protein.
 
    
0.823
SDX70866.1
Hypothetical protein.
       0.773
SDX70778.1
Hypothetical protein.
       0.572
SDW69848.1
Poly-beta-1,6 N-acetyl-D-glucosamine synthase.
    
 0.508
SDX14101.1
Chitinase.
    
  0.487
SDX01018.1
Lanthionine synthetase C-like protein.
  
     0.452
SDX69328.1
RHS repeat-associated core domain-containing protein.
  
     0.414
SDX55053.1
RHS repeat-associated core domain-containing protein.
  
     0.411
Your Current Organism:
Hydrobacter penzbergensis
NCBI taxonomy Id: 1235997
Other names: CCUG 62278, Chitinophagaceae bacterium EM 4, DSM 25353, H. penzbergensis, Hydrobacter penzbergensis Eder et al. 2015, strain EM 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.