STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000613865_02075Unannotated protein. (86 aa)    
Predicted Functional Partners:
GCA_000613865_02076
Unannotated protein.
 
     0.901
GCA_000613865_02702
Unannotated protein.
  
     0.442
GCA_000613865_02092
Unannotated protein.
 
    0.439
putA
Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.438
GCA_000613865_02077
Unannotated protein.
       0.434
GCA_000613865_02078
Unannotated protein.
       0.434
GCA_000613865_02079
Unannotated protein.
       0.434
GCA_000613865_02080
Unannotated protein.
       0.434
HK26_01940
Unannotated protein.
       0.434
GCA_000613865_02276
Unannotated protein.
  
     0.431
Your Current Organism:
Acetobacter okinawensis
NCBI taxonomy Id: 1236501
Other names: A. okinawensis JCM 25146, Acetobacter okinawensis 1-35, Acetobacter okinawensis JCM 25146, Acetobacter okinawensis LMG 26457, Acetobacter sp. 1-35, Acetobacter sp. JCM 25146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.