STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000614025_01834Unannotated protein. (234 aa)    
Predicted Functional Partners:
GCA_000614025_02360
Unannotated protein.
 
  
 0.842
GCA_000614025_02552
Unannotated protein.
 
 
 0.833
GCA_000614025_01832
Unannotated protein.
  
    0.824
GCA_000614025_01833
Unannotated protein.
       0.824
GCA_000614025_01628
Unannotated protein.
 
  
 0.781
GCA_000614025_02500
Unannotated protein.
 
    0.718
GCA_000614025_01831
Unannotated protein.
       0.626
GCA_000614025_02536
Unannotated protein.
  
 
 0.596
GCA_000614025_01549
Unannotated protein.
  
    0.582
GCA_000614025_01835
Unannotated protein.
       0.538
Your Current Organism:
Prevotella aurantiaca
NCBI taxonomy Id: 1236508
Other names: P. aurantiaca JCM 15754, Prevotella aurantiaca JCM 15754, Prevotella aurantiaca OMA31, Prevotella sp. JCM 15754
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.