STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU68966.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)    
Predicted Functional Partners:
uppP
UDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.841
truB
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.799
AKU68969.1
S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.761
AKU68970.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
AKU69056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
AKU68965.1
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.655
AKU68539.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.646
AKU69379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AKU69039.1
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
AKU68789.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
Your Current Organism:
Prevotella fusca
NCBI taxonomy Id: 1236517
Other names: P. fusca JCM 17724, Prevotella fusca CCUG 57946, Prevotella fusca DSM 22504, Prevotella fusca JCM 17724, Prevotella fusca W1435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.