STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU69208.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)    
Predicted Functional Partners:
AKU69207.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
AKU70208.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
AKU69206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
AKU70614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
AKU69097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
AKU70630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
AKU70629.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
AKU69727.1
Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
AKU70714.1
Phosphoprotein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
AKU70451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
Your Current Organism:
Prevotella fusca
NCBI taxonomy Id: 1236517
Other names: P. fusca JCM 17724, Prevotella fusca CCUG 57946, Prevotella fusca DSM 22504, Prevotella fusca JCM 17724, Prevotella fusca W1435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.