STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000614545_00584Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000614545_00759
Unannotated protein.
 
 
 0.995
GCA_000614545_01371
Unannotated protein.
 
 0.995
GCA_000614545_01228
Unannotated protein.
 
 
 0.989
GCA_000614545_01551
Unannotated protein.
  
 0.958
GCA_000614545_03403
Unannotated protein.
  
 0.958
GCA_000614545_01227
Unannotated protein.
 
 0.953
GCA_000614545_00132
Unannotated protein.
 
  
 0.928
GCA_000614545_01372
Unannotated protein.
 
 
 0.923
GCA_000614545_01046
Unannotated protein.
 
  
 0.922
GCA_000614545_01864
Unannotated protein.
 
  
 0.915
Your Current Organism:
Asaia platycodi
NCBI taxonomy Id: 1236525
Other names: A. platycodi JCM 25414, Asaia platycodi JCM 25414, Asaia platycodi T-683, Asaia sp. T-683
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.