STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000614975_01219Unannotated protein. (320 aa)    
Predicted Functional Partners:
GCA_000614975_00229
Unannotated protein.
  
     0.718
GCA_000614975_00252
Unannotated protein.
  
     0.708
GCA_000614975_03573
Unannotated protein.
  
     0.689
GCA_000614975_01377
Unannotated protein.
  
     0.671
GCA_000614975_01221
Unannotated protein.
  
     0.642
GCA_000614975_01575
Unannotated protein.
  
     0.634
GCA_000614975_01082
Unannotated protein.
  
     0.612
GCA_000614975_00104
Unannotated protein.
  
     0.599
GCA_000614975_02524
Unannotated protein.
  
     0.595
GCA_000614975_00649
Unannotated protein.
  
    0.594
Your Current Organism:
Shewanella marina
NCBI taxonomy Id: 1236542
Other names: S. marina JCM 15074, Shewanella marina JCM 15074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.