STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI84869.2Hypothetical protein. (118 aa)    
Predicted Functional Partners:
AGI86257.1
Putative RNA-binding protein; COG1094.
  
 0.996
rps6e
SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.856
eif2g
Eukaryotic translation initiation factor 2 gamma subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
  
    0.829
AGI86390.1
NMD3.
  
    0.682
AGI84904.1
Hypothetical protein.
 
     0.676
AGI84916.1
Single stranded DNA-binding protein RPA2.
  
    0.658
AGI85136.1
Single-stranded-DNA-specific exonuclease RecJ.
 
     0.641
AGI85519.1
Putative phosphoserine phosphatase.
  
     0.639
AGI84760.1
Signal peptidase I.
  
     0.636
AGI84985.1
rRNA biogenesis protein Nop5/Nop56.
   
 
 0.624
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.