STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI84954.2NADH-ubiquinone oxidoreductase chain D. (366 aa)    
Predicted Functional Partners:
AHA34030.1
COG0838 NADH:ubiquinone oxidoreductase subunit 3 chain A.
 
 0.999
AGI84952.1
NADH-ubiquinone oxidoreductase chain B; Belongs to the complex I 20 kDa subunit family.
 0.999
AGI84953.1
NADH-quinone oxidoreductase chain C.
 
 0.999
AGI84955.1
NADH-ubiquinone oxidoreductase chain H.
 0.999
AGI84956.1
Hydrogenase 4 Fe-S subunit.
 
 0.999
AGI84957.1
NADH-ubiquinone oxidoreductase chain J.
  
 0.999
AGI84959.1
NADH-ubiquinone oxidoreductase chain K.
 
 
 0.999
AGI84960.1
NADH-ubiquinone oxidoreductase chain L.
 
 0.999
AGI84961.1
NADH-ubiquinone oxidoreductase chain M.
 
 0.999
AGI84962.1
NADH-ubiquinone oxidoreductase chain N.
 
 0.999
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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