STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI85279.1Hypothetical protein. (752 aa)    
Predicted Functional Partners:
AGI85280.1
Hypothetical protein; Pyrrolysine-containing.
       0.773
rps5
SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.
    
 0.648
AGI85336.1
Hypothetical protein.
 
 
 
 0.639
AGI85783.1
AAA ATPase.
  
     0.635
AGI85784.1
Hypothetical protein.
 
 
 
 0.616
AGI85281.1
Teichoic acid export ATP-binding protein TagH.
 
    
0.605
AGI85586.1
Hypothetical protein.
  
     0.600
AGI85782.1
Hypothetical protein.
 
 
 
 0.567
AGI85282.1
O-antigen export system permease protein RfbD.
       0.554
rps11
SSU ribosomal protein S14e (S11p); Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 
  0.544
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.