STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI85336.1Hypothetical protein. (444 aa)    
Predicted Functional Partners:
AGI85796.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
  
 0.704
AGI85279.1
Hypothetical protein.
 
 
 
 0.639
AGI85335.1
Hypothetical protein.
       0.594
AGI85606.1
Enhanced entry protein EnhC.
  
     0.589
AGI85337.1
Peptidyl-tRNA hydrolase, archaeal type.
  
    0.545
rpoD
DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family.
   
 0.521
AGI86361.1
DNA-directed RNA polymerase subunit B; Belongs to the RNA polymerase beta chain family.
  
 0.511
AGI86038.1
Caspase-1, p20.
  
     0.504
AGI85535.1
Hypothetical protein.
  
     0.503
AGI84907.1
Hypothetical protein.
  
 0.494
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.