STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI85421.2Cysteine desulfurase. (377 aa)    
Predicted Functional Partners:
AGI85673.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
  
 0.999
AGI86268.1
tRNA S(4)U 4-thiouridine synthase (former ThiI).
 
 0.971
AGI84925.1
ThiI.
  
 0.968
AGI85316.1
Sulfur carrier protein adenylyltransferase ThiF.
   
 0.955
AGI86207.1
Molybdopterin biosynthesis MoeB protein.
   
 0.955
AGI85911.1
HesB family protein.
  
  
 0.803
AGI86060.1
(R)-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.710
psmB
Proteasome subunit beta, archaeal; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
      0.619
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
  
  
 0.589
AGI85796.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
 
  
 0.577
Your Current Organism:
Methanomethylophilus alvus
NCBI taxonomy Id: 1236689
Other names: C. Methanomethylophilus alvus Mx1201, Candidatus Methanomethylophilus alvus Mx1201, archaeon Mx1201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.